Information for 1-VCACGTGSBRNGN (Motif 1)

T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
Reverse Opposite:
G A T C A G T C T A G C A G C T T G C A T A C G A G T C C G T A A G T C C T A G A C G T A C T G A G C T
p-value:1e-60
log p-value:-1.388e+02
Information Content per bp:1.604
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif21.37%
Number of Background Sequences with motif2454.0
Percentage of Background Sequences with motif5.45%
Average Position of motif in Targets52.7 +/- 22.7bp
Average Position of motif in Background48.9 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---VCACGTGSBRNGN
NNACCACGTGGT----
 A C G T A C G T A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--VCACGTGSBRNGN
NNCCACGTGG-----
 A C G T A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-VCACGTGSBRNGN
NACACGTGCN----
 A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-VCACGTGSBRNGN
NVCACGTG------
 A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-VCACGTGSBRNGN
NNCACGTGGT----
 A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:VCACGTGSBRNGN
-CACGTGNC----
 T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-VCACGTGSBRNGN
ACCACGTGCC----
 A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VCACGTGSBRNGN
-CACGTGNT----
 T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VCACGTGSBRNGN
-CACGTGGC----
 T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--VCACGTGSBRNGN
NNCCACGTGG-----
 A C G T A C G T T C A G A G T C C G T A A G T C C T A G A C G T A C T G A T G C A C G T T C G A A T C G T C A G C T A G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T