Information for 3-ATGTTAAAGCAGG (Motif 9)

T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G
Reverse Opposite:
A G T C G T A C A C G T A C T G G T A C A C G T A C G T A C G T T C G A C T G A A G T C G C T A A G C T
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.686
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.6 +/- 23.9bp
Average Position of motif in Background53.1 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGG
TATGCWAATBAV--
 A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAAAGCAGG----
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAAAGCAGG----
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ATGTTAAAGCAGG--
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGTTAAAGCAGG--
AAGGKGRCGCAGGCA
 T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTAAAGCAGG
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAAAGCAGG-
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTAAAGCAGG
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATGTTAAAGCAGG--
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAAAGCAGG
TATGCAAAT-----
 A C G T T C G A C G A T A C T G G A C T A G C T G T C A G T C A G T C A C A T G G T A C T C G A A C T G T C A G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T