Information for 1-GCTCCGCCCCGCC (Motif 3)

A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C
Reverse Opposite:
T C A G A T C G G T A C C T A G A C T G A C T G A T C G G T A C A C T G A T C G T C G A T A C G T A G C
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.752
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif379.2
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets51.9 +/- 23.9bp
Average Position of motif in Background49.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGCCCCGCC
GGCCCCGCCCCC--
 A C G T A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCTCCGCCCCGCC------
--TACGCCCCGCCACTCTG
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCTCCGCCCCGCC
GCTCCGCCCMCY-
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCTCCGCCCCGCC--
TCACCCCGCCCCAAATT
 A C G T A C G T A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTCCGCCCCGCC
GCCCCGCCCCC--
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGCCCCGCC--
ATCCCCGCCCCTAAAA
 A C G T A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTCCGCCCCGCC--
GCCCCGCCCCCTCCC
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GCTCCGCCCCGCC----
---NAGCCCCGCCCCCN
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.70
Offset:5
Orientation:forward strand
Alignment:GCTCCGCCCCGCC--
-----GCCCCGCCCC
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCTCCGCCCCGCC-----
--TCGACCCCGCCCCTAT
 A T C G A T G C A G C T A T G C T G A C A C T G T A G C A G T C T A G C G A T C C A T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T