Information for 7-GCTTGCTTCGAGA (Motif 17)

A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C T G C T G A C G T A A C T G A G T C C T G A C G T A C T A G A G T C
p-value:1e-3
log p-value:-8.906e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 18.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTTGCTTCGAGA
----GCTTCC---
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTTGCTTCGAGA--
KGTTGCTAGGMAACA
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

POL001.1_MTE/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GCTTGCTTCGAGA
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCTTCGAGA
TCNCCTGCTGNGNNN
 A C G T A C G T A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCTTCGAGA
TNTCCTGCTGTGNNG
 A C G T A C G T A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTTGCTTCGAGA-----
---TTGACCGAGAATTCC
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCTTGCTTCGAGA---
----GGTTAGAGACCT
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCTTGCTTCGAGA------
--CTACTTGGATACGGAAT
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCTTGCTTCGAGA---
-BCNGGTTCTAGANCN
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCTTGCTTCGAGA
----GCTCCG---
 A C T G A G T C A C G T A G C T A C T G A G T C A C G T A G C T G T A C A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T