Information for 4-CCCCTAGGTGCCAGCB (Motif 10)

A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
Reverse Opposite:
T A C G T A C G A T G C A C G T A C T G A C T G A G T C C G T A A G T C A G T C A G C T C T G A A C T G A C T G C T A G A C T G
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 18.0bp
Average Position of motif in Background54.5 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGGTGCCAGCB
GCACCCCTGGGTGCC----
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGGTGCCAGCB-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCCCTAGGTGCCAGCB
-----AGGTGTCA---
 A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTAGGTGCCAGCB
TCCCCTGGGGAC-----
 A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCCTAGGTGCCAGCB
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

T/MA0009.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGGTGCCAGCB
TCACACCTAGGTGTGA---
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTAGGTGCCAGCB---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTAGGTGCCAGCB
NTCNTCCCCTATNNGNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCCCTAGGTGCCAGCB--
-----AGGTGNCAGACAG
 A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCCCTAGGTGCCAGCB
------VBTGWCAGCB
 A G T C A G T C A G T C A G T C A G C T C T G A A C T G A C T G C G A T A C T G G T A C A G T C C G T A A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C