Information for 2-GCCCGCCTGDTTC (Motif 8)

A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
Reverse Opposite:
C T A G C T G A C T G A G C T A A T G C G T C A A C T G T C A G A G T C A C T G A T C G A C T G G T A C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif10.39%
Number of Background Sequences with motif120.9
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets44.7 +/- 26.8bp
Average Position of motif in Background49.8 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCTGDTTC
AGCGCGCC------
 A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCCTGDTTC
TTCCCGCCWG----
 A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCCTGDTTC
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCTGDTTC-
GCCCCGCCCCCTCCC
 A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTGDTTC
NNTTCCCGCCC-----
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCCGCCTGDTTC
TTTCCCGCCMAV---
 A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCCTGDTTC
VDTTTCCCGCCA-----
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTGDTTC
DTTTCCCGCC------
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTGDTTC
NCTTCCCGCCC-----
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTGDTTC
NTCGCGCGCCTTNNN-
 A C G T A C G T A C G T A C T G A G T C A T G C G T A C A C T G A G T C A G T C A C G T A T C G C A G T A G C T A G C T A G T C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T