Information for 3-GGGRATAGTGTGRCAG (Motif 5)

T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A G C T A G T C C G T A A G T C G T C A A G T C C G A T C T G A A C G T A G C T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.827
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 25.7bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG-
-----NTGATTGACAGN
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG--
------TGAGTGACAGSC
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG-
-----BTGABTGACAGS
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GGGRATAGTGTGRCAG-
---------TTGACAGG
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG
----ATGGGGTGAT--
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GGGRATAGTGTGRCAG-
---------TTGACAGC
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGRATAGTGTGRCAG-
------AGGGTAACAGC
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGRATAGTGTGRCAG------
-----GATATTGACAGCTGCGT
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG
----GTGGCGTGACNG
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GGGRATAGTGTGRCAG--
--------VBTGWCAGCB
 T A C G A C T G A C T G C T A G C G T A A G C T C G T A A C T G A C G T A C T G C G A T A C T G C T A G A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C