Information for 2-TACACATTATAAATAT (Motif 2)

C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
Reverse Opposite:
T C G A C A G T C G T A A G C T A G C T A C G T C G T A C G A T T C G A T C G A A C G T T A C G A C G T C T A G A C G T G T C A
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets66.6 +/- 27.1bp
Average Position of motif in Background52.7 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TACACATTATAAATAT-
-NANTATTATAATTNNN
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TACACATTATAAATAT
AATATACATGTAAAACA-
 A C G T A C G T C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TACACATTATAAATAT
TCCAATCCACA----------
 A C G T A C G T A C G T A C G T A C G T C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TACACATTATAAATAT-
---AAATAAGAAAAAAC
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TACACATTATAAATAT
----NGYCATAAAWCH
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
A C G T A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TACACATTATAAATAT-
-----ACTATAAATAGA
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TACACATTATAAATAT-----
------GTATAAAAGGCGGGG
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TACACATTATAAATAT-----
------GTATAAAAGGCGGGG
 C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

FOXO6/MA0849.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TACACATTATAAATAT
GTAAACA----------
 A C G T C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
C T A G C G A T T G C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TACACATTATAAATAT
AATATACATGTAAAATT-
 A C G T A C G T C A G T T G C A A G T C C G T A A T G C C G T A A G C T A C G T G C T A C G A T C G T A C T G A C T G A C G A T G T C A A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T