Information for 12-CAGGGCCCAGTGA (Motif 19)

A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
Reverse Opposite:
A C G T A G T C C T G A A G T C A C G T A C T G C T A G A T C G A G T C A G T C A G T C A C G T A C T G
p-value:1e-2
log p-value:-6.560e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.2 +/- 32.3bp
Average Position of motif in Background47.3 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA
---TGCCCAGNHW
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGGGCCCAGTGA
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA-----
--TGACCCAGTGACCTAC
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCCCAGTGA-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA---
NNNNTGCCAGTGATTG
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

ESR1/MA0112.3/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA----
CAGGTCACCGTGACCTT
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA---
--NAGGTCANTGACCT
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGGGCCCAGTGA--
NAGGTCACNNTGACC
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGGCCCAGTGA
CAAAGGTCAG---
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGGGCCCAGTGA---
-AGGNCANNGTGACCT
 A G T C C G T A A C T G A C T G A C T G A T G C A G T C A G T C C G T A A C T G A G C T A C T G C G T A A C G T A C G T A C G T
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T