p-value: | 1e-5 |
log p-value: | -1.207e+01 |
Information Content per bp: | 1.897 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 2.60% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 66.0 +/- 22.0bp |
Average Position of motif in Background | 35.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTGGGTACTGTGCCAA- -TTGGCANNNTGCCAAG |
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NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | TTGGGTACTGTGCCAA-- --------GGTGCCAAGT |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTGGGTACTGTGCCAA --TGGCACCATGCCAA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | TTGGGTACTGTGCCAA- --------CGTGCCAAG |
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PB0051.1_Osr2_1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGGGTACTGTGCCAA CNNNGCTACTGTANNN- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | TTGGGTACTGTGCCAA ----------TGCCAA |
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Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTGGGTACTGTGCCAA GTAGGTCACTGGGTCA- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TTGGGTACTGTGCCAA-- ---------ATGCCAACC |
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PB0050.1_Osr1_1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGGGTACTGTGCCAA TNNTGCTACTGTNNNN- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TTGGGTACTGTGCCAA- ---------TTGCCAAG |
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