Information for 9-GCGCTGGGGTTAA (Motif 13)

A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
Reverse Opposite:
C A G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.953
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 22.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCGCTGGGGTTAA
--GCTGTGGTTT-
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTTAA
---CTGTGGTTTN
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGCTGGGGTTAA----
CTCCAGGGGTCAATTGA
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCGCTGGGGTTAA
--NNTGTGGTTT-
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGCTGGGGTTAA
-GTCTGTGGTTT-
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGGGTTAA
---TTGCGGTTT-
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCGCTGGGGTTAA-
-----GGGATTANN
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGCTGGGGTTAA
---ATGGGGTGAT
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCGCTGGGGTTAA
-----GGGATTAA
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGCTGGGGTTAA----
GGCGAGGGGTCAAGGGC
 A C T G A G T C A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T C G A T C G T A G C T A A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C