Information for 5-CCACTATDAHHCT (Motif 10)

G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C A G T A C G T G A C T C T G A A G C T C G T A A C T G A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.788
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.0 +/- 6.0bp
Average Position of motif in Background30.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACTATDAHHCT
ATCCAC---------
 A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACTATDAHHCT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCACTATDAHHCT
MRSCACTYAA-----
 A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACTATDAHHCT
ACCACTTGAA----
 A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACTATDAHHCT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

GFY(?)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCACTATDAHHCT-
--ACTACAATTCCC
 G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T A C G T
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCACTATDAHHCT
CCACTTGAA----
 G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACTATDAHHCT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACTATDAHHCT
AASCACTCAA-----
 A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCACTATDAHHCT
NTCNTCCCCTATNNGNN-
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C A C G T C T G A A G C T C G T A C G T A G C T A G A C T A G T C A G C T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T