Information for 14-CGACGTATAT (Motif 30)

A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T G C T A A G T C A C T G A C G T A G T C A C T G
p-value:1e-2
log p-value:-6.160e+00
Information Content per bp:1.909
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGACGTATAT---
--AAGGATATNTN
 A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGACGTATAT-------
ANNNGGATATATCCNNN
 A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------CGACGTATAT
NNTTTANNCGACGNA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGACGTATAT--
--ATGAATATTC
 A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGACGTATAT--
--ATGMATATDC
 A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGACGTATAT-
GAATGACGAATAAC
 A C G T A C G T A C G T A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGACGTATAT
ATGACGTA---
 A C G T A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGACGTATAT-
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGACGTATAT----
CTCATGAATATTCAT
 A C G T A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGACGTATAT-------
---CTAATATTGCTAAA
 A G T C A C T G C G T A G T A C A C T G C A G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A