Information for 3-TTTCCGAGATGCTAWY (Motif 3)

A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
Reverse Opposite:
C T A G C G A T A G C T G T C A C T A G A G T C C G T A A C G T G A T C A C G T A G T C A C T G C T A G C G T A C G T A C G T A
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.793
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 19.8bp
Average Position of motif in Background35.9 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTCCGAGATGCTAWY
ATTTCCAAGAA------
 A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWY
TTTCCCAGAAN-----
 A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGAGATGCTAWY
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTCCGAGATGCTAWY
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGAGATGCTAWY
ATTTTCCGNNAAAT----
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCCGAGATGCTAWY
NTTTTACGAGN-------
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGAGATGCTAWY
ANATTTTACGAGNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWY
TTTCCTGGAAA-----
 A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTCCGAGATGCTAWY
TTTCCNGGAAAN----
 A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTTCCGAGATGCTAWY---
-------TATGCWAATBAV
 A C G T A C G T C G A T A G T C A G T C C T A G C G T A C A T G C G T A C G A T A C T G A G T C A C G T C T G A C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G