Information for 11-ACTAATATAC (Motif 29)

C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G A T C G T A A G C T A C G T C G T A A C T G A C G T
p-value:1e-2
log p-value:-6.869e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif22.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.0 +/- 25.3bp
Average Position of motif in Background54.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTAATATAC
NTAATTAATAT--
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-----
-CTAATATTGCTAAA
 C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-----
-CTAATATTGCTAAA
 C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAATATAC
TCTTTANTAATANN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTAATATAC-
-CCAATAAAAA
 C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACTAATATAC
TTATGTACTAATAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTAATATAC----
GTAACTAATTAACTACT
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTAATATAC---
-SSAATCCACANN
 C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACTAATATAC
CCYMATAAAA
 C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ACTAATATAC
ACCGTGACTAATTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C T G A A C G T C G T A A C G T C G T A A G T C
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T