Information for 7-GATGTCAATG (Motif 27)

A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
Reverse Opposite:
A G T C C G T A A G C T A C G T C T A G C G T A A G T C G T C A A C G T A G T C
p-value:1e-4
log p-value:-9.604e+00
Information Content per bp:1.890
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif36.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.4 +/- 22.8bp
Average Position of motif in Background49.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GATGTCAATG--
TATGCWAATBAV
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GATGTCAATG
RHTGWCAR--
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GATGTCAATG--
WATGCAAATGAG
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATGTCAATG
CCTGTCAA--
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GATGTCAATG--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GATGTCAATG
-NTGTCAN--
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATGTCAATG
GCTGTCAA--
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GATGTCAATG-
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GATGTCAATG
AAGATGATGTCAT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATGTCAATG
TATGCAAAT-
 A C T G C G T A A C G T A C T G A C G T A G T C C G T A C T G A A C G T C T A G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T