Information for 6-GTCTTGCTGT (Motif 26)

A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T
Reverse Opposite:
C G T A G T A C G T C A A C T G G T A C C G T A C G T A A C T G C G T A T A G C
p-value:1e-4
log p-value:-9.698e+00
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif462.4
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets50.8 +/- 23.6bp
Average Position of motif in Background49.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGCTGT----
NNTCCTGCTGTGNNN
 A C G T A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGCTGT----
TNTCCTGCTGTGNNG
 A C G T A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGCTGT----
TCNCCTGCTGNGNNN
 A C G T A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTCTTGCTGT--
--CCTGCTGAGH
 A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTGCTGT-
CCCCCTGCTGTG
 A C G T A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCTTGCTGT--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTTGCTGT
GTCATN----
 A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCTTGCTGT
--CTTCCGGT
 A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T
A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCTTGCTGT
CACTTCCTGT
 A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCTTGCTGT-
-ACTTCCGGTT
 A T C G A C G T A G T C G C A T A C G T A C T G A G T C A C G T A C T G G C A T A C G T
A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T