Information for 5-ARKGAGCTGG (Motif 25)

G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A T C G G T A C A C G T A G T C G T A C A G C T C G A T
p-value:1e-4
log p-value:-1.145e+01
Information Content per bp:1.778
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif350.4
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets51.6 +/- 24.7bp
Average Position of motif in Background52.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ARKGAGCTGG
-CGGAGC---
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ARKGAGCTGG
NAACAGCTGG
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARKGAGCTGG
NAHCAGCTGD
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ARKGAGCTGG
---CAGCC--
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ARKGAGCTGG-
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ARKGAGCTGG--
-GACAGCTGCAG
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ARKGAGCTGG-
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ARKGAGCTGG--
-AACAGCTGCAG
 G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ARKGAGCTGG-
VNAVCAGCTGGC
 A C G T G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ARKGAGCTGG
NTAATGAGCT--
 A C G T A C G T G C T A C T G A A C T G C T A G C G T A A C T G A T G C C G A T C A T G A C T G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T