Information for 12-TGTACATTTAGATGAT (Motif 24)

A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T G T A C A C G T C T G A C T G A C T G A A C G T A C T G A C G T C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.936
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 22.8bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0087.1_Irx6/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATTTAGATGAT
ANTTNTACATGTANTTN--
 A C G T A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTACATTTAGATGAT
TAAATACATGTAAAATT-
 A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTACATTTAGATGAT
AATATACATGTAATATA-
 A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTACATTTAGATGAT
AATATACATGTAAAACA-
 A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATTTAGATGAT
ANTNNTACATGTANNTN--
 A C G T A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTACATTTAGATGAT
AAAATACATGTAATACT-
 A C G T A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGTACATTTAGATGAT
AYATGYATATGCATR--
 A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGTACATTTAGATGAT
TGTATATATATACC--
 A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGTACATTTAGATGAT
GACCACATTCATACAAT
 A C G T A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TGTACATTTAGATGAT
--NNCAATTANN----
 A C G T C T A G A C G T C G T A A G T C C G T A A G C T A G C T A G C T C G T A A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T