Information for 3-BKGTKGAGTG (Motif 17)

A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G C T A G T C G T A C C G T A A G T C G T A C T A C G
p-value:1e-5
log p-value:-1.367e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif492.4
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets57.5 +/- 29.8bp
Average Position of motif in Background49.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:BKGTKGAGTG--
--BTBRAGTGSN
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG---
--CTTGAGTGGCT
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:BKGTKGAGTG---
---TTGAGTGSTT
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG--
--ATGGGGTGAT
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.77
Offset:3
Orientation:forward strand
Alignment:BKGTKGAGTG---
---TTRAGTGSYK
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG--
--CTYRAGTGSY
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG--
--GTGGGGTGAT
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG----
--GTGGCGTGACNG
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.73
Offset:2
Orientation:forward strand
Alignment:BKGTKGAGTG--
--ATGGGGTGAT
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:BKGTKGAGTG-
--NTCAAGTGG
 A T G C A C T G C T A G A C G T A C T G A C T G T C G A A C T G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G