Information for 5-AGGGCCCAGTGAT (Motif 13)

C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A G T A C C G A T A T C G A C T G C T A G A G T C A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.843
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 32.0bp
Average Position of motif in Background57.2 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGGCCCAGTGAT-----
-AATCCCTTTGATCTATC
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCCAGTGAT-
NAGGTCACNNTGACC
 A C G T C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AGGGCCCAGTGAT---
------CNGTGATTTN
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGCCCAGTGAT-----
-ATTTCCTTTGATCTATA
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGGGCCCAGTGAT----
-------ATTGATTYND
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGCCCAGTGAT--
AGGNCANNGTGACCT
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCCAGTGAT---
CAGGTCACCGTGACCTT
 A C G T C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGGCCCAGTGAT-------
---ACCGGTTGATCACCTGA
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGGCCCAGTGAT------
--NNNNNATTGATGNGTGN
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGGCCCAGTGAT
AGGVNCCTTTGT-
 C G T A A C T G A C T G C T A G A G T C G T A C A T G C C G T A A C T G A C G T A C T G C G T A A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T