Information for 2-GKGTGGCTGGCGT (Motif 11)

A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
Reverse Opposite:
C G T A T A G C A T C G A G T C A G T C G T C A T A C G A G T C A G T C C G T A G T A C G T A C T A G C
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 28.8bp
Average Position of motif in Background51.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GKGTGGCTGGCGT---
NGTAGGTTGGCATNNN
 A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GKGTGGCTGGCGT
NGCGTGGGCGGR--
 A C G T A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GKGTGGCTGGCGT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GKGTGGCTGGCGT
NNHTGTGGTTWN---
 A C G T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GKGTGGCTGGCGT
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GKGTGGCTGGCGT
--GTGGAT-----
 A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GKGTGGCTGGCGT
TGCGTGGGYG----
 A C G T A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GKGTGGCTGGCGT
--GTGGGGGGGG-
 A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GKGTGGCTGGCGT
-CGTGGGTGGTCC
 A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GKGTGGCTGGCGT
----GGTTGGCAT
 A T C G A C T G A C T G A C G T A C T G A C T G A T G C A C G T C T A G A C T G A T G C A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T