Information for 1-GTGCTTGCAA (Motif 3)

T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A C G T A A C T G A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.894
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.45%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.3 +/- 19.7bp
Average Position of motif in Background54.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGCTTGCAA
TTGCGTGCVA
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGCTTGCAA-
CTTCTGGGAAA
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTGCTTGCAA----
----TTGCAACATN
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGCTTGCAA
TTGATTGN--
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTGCTTGCAA
-TGCGTG---
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGCTTGCAA
-TGTTTAC--
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGCTTGCAA--
-TTCTTGGAAAN
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGCTTGCAA-
---CTTGGCAA
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGCTTGCAA
CTGTTTAC--
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGCTTGCAA----
--AGATGCAATCCC
 T A C G A C G T A C T G A G T C A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C