Information for 4-GTAAAAACAACDA (Motif 10)

A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A
Reverse Opposite:
A C G T G T A C C T A G A C G T A C G T C T A G A C G T A C G T A C G T A G C T G A C T C G T A G T A C
p-value:1e-6
log p-value:-1.548e+01
Information Content per bp:1.826
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets31.3 +/- 21.2bp
Average Position of motif in Background56.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTAAAAACAACDA
NTTNAGAACAATTA
 A C G T A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTAAAAACAACDA---
-AACAAACAACAAGAG
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTAAAAACAACDA--
NNTNANAACAATTNNA
 A C G T A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTAAAAACAACDA-
ATATCAAAACAAAACA
 A C G T A C G T A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTAAAAACAACDA---
TTAAGAACAATAAATT
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTAAAAACAACDA----
--AAAAATAACAAACGG
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTAAAAACAACDA---
TTTAGAACAATAAAAT
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTAAAAACAACDA-------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTAAAAACAACDA
--GTAAACAAT--
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTAAAAACAACDA----
-AAAAACCAATTAAGAA
 A C T G A C G T C T G A C T G A C G T A C G T A C G T A A G T C C G T A C G T A A G T C C A T G C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A