Information for 7-CTACGGCAGG (Motif 9)

A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G
Reverse Opposite:
A T G C T G A C G A C T A C T G T A G C T A G C A T C G G C A T T G C A T C A G
p-value:1e-13
log p-value:-3.194e+01
Information Content per bp:1.655
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.24%
Number of Background Sequences with motif612.7
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets52.4 +/- 30.2bp
Average Position of motif in Background49.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTACGGCAGG
-TACGTCAT-
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTACGGCAGG
--ACGTCA--
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTACGGCAGG
TTACGTCATN
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTACGGCAGG---
-CACAGCAGGGGG
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTACGGCAGG-----
---SDGCAGGTGCNS
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTACGGCAGG
TTACGTAA--
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTACGGCAGG---
--AAGGCAAGTGT
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTACGGCAGG----
ATTTACGACAAATAGC
 A C G T A C G T A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTACGGCAGG-----
DCHCAGCAGGRGGCC
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTACGGCAGG---
----AACAGGTGT
 A G T C A C G T C G T A T A G C A T C G A T C G T G A C C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T