Information for 24-TGGAACAGAGTGA (Motif 25)

A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G T C C G A T A T G C A C G T C T A G A C G T A C G T A G T C A G T C G T C A
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 26.4bp
Average Position of motif in Background53.4 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGGAACAGAGTGA
TGGAACAGMA---
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGAACAGAGTGA
CCAGGAACAG-----
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGAACAGAGTGA
TGGAAAA------
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGAACAGAGTGA----
-AGNACAGNCTGTTCTN
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

NR3C2/MA0727.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGAACAGAGTGA----
GGGAACACAATGTTCCC
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGAACAGAGTGA----
GGGAACACGGTGTACCC
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAACAGAGTGA----
-AGNACANNNTGTNCTN
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C1/MA0113.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGAACAGAGTGA----
NGGAACATNATGTACCC
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAACAGAGTGA
-GGAACAAAGR--
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGAACAGAGTGA----
--GAACADWATGTTCTT
 A C G T A C T G A C T G C G T A C G T A A G T C C G T A A T C G C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T