Information for 22-CGAGACTGGGATC (Motif 20)

G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.949
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 34.7bp
Average Position of motif in Background41.5 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGAGACTGGGATC
--WDNCTGGGCA-
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGACTGGGATC
NNNACCGAGAGTNNN---
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGACTGGGATC
GNNACCGAGAATNNN---
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGAGACTGGGATC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGAGACTGGGATC-----
-TATTATGGGATGGATAA
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGAGACTGGGATC
TTGACCGAGAATTCC---
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGAGACTGGGATC
CCAGACAG-----
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGAGACTGGGATC-----
--AGAGCGGGGTCAAGTA
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGAGACTGGGATC---
-NAGATWNBNATCTNN
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CGAGACTGGGATC--
-------NGGATTAN
 G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C T G G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T