Information for 16-ATTGGCTATG (Motif 21)

G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
Reverse Opposite:
T A G C G T C A A G C T C G T A A C T G A G T C A G T C C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.857
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.3 +/- 25.5bp
Average Position of motif in Background52.6 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGCTATG
TGATTGGCTANN
 A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTATG
CCGATTGGCT---
 A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATTGGCTATG
-TTGGCA---
 G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATTGGCTATG
NTTGGCANN-
 G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTATG--
CTGATTGGTCNATTT
 A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATTGGCTATG
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------ATTGGCTATG
TAAACTAATTAGCTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTGGCTATG
NNTTGGCANN-
 A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ATTGGCTATG
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTGGCTATG
-TWGTCTGV-
 G T C A A C G T A C G T A C T G A C T G G T A C A C G T T C G A A C G T A C T G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T