Information for 12-GMSCAGCTCSSCCYCW (Motif 19)

A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
Reverse Opposite:
C G A T A C T G C T G A A C T G A C T G A T G C A T G C A T C G C G T A A C T G A T G C A C G T A C T G A T C G A C T G A G T C
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 17.5bp
Average Position of motif in Background45.9 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GMSCAGCTCSSCCYCW
-----GCTCGGSCTC-
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GMSCAGCTCSSCCYCW-
---NAGCCCCGCCCCCN
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GMSCAGCTCSSCCYCW-
-----GCTCCGCCCMCY
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW
----GGCCCCGCCCCC
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW
-----GCCCCGCCCCC
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW
-TGCAGCTGTCCCT--
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW
-----GCTCCG-----
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW
-CGCAGCTGCG-----
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GMSCAGCTCSSCCYCW----
----ATCCCCGCCCCTAAAA
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GMSCAGCTCSSCCYCW
CAGCAGCTGN------
 A C T G G T A C A T G C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A T C G A G T C A G T C A G C T A G T C C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T