Information for 11-CCGAGACTCGGAACGT (Motif 23)

A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A G T A C A C T G C G A T A C G T A G T C A G T C A T C G C G T A A C T G A C G T A T G C A C G T A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.5 +/- 24.7bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGACTCGGAACGT
GNNACCGAGAATNNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGACTCGGAACGT
NNNACCGAGAGTNNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGAGACTCGGAACGT
TTGACCGAGAATTCC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CCGAGACTCGGAACGT
---WDNCTGGGCA---
 A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CCGAGACTCGGAACGT
ATAAACCGAAACCAA------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----CCGAGACTCGGAACGT
CTGATCGAAACCAAAGT---
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CCGAGACTCGGAACGT
-CCAGACAG-------
 A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:CCGAGACTCGGAACGT
--------CGGAGC--
 A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.46
Offset:5
Orientation:forward strand
Alignment:CCGAGACTCGGAACGT--
-----TAACGACACGTGC
 A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.45
Offset:2
Orientation:forward strand
Alignment:CCGAGACTCGGAACGT
--GAGAACCGAAACTG
 A G T C A G T C A C T G C G T A A T C G C G T A A G T C A C G T A T G C A C T G A C T G C G T A C G T A A G T C A C T G A C G T
A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G