Information for 10-GCTTCACTTY (Motif 18)

A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
Reverse Opposite:
T C A G T C G A G T C A T A C G A G C T T A C G T G C A T G C A A T C G T G A C
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.527
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif155.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets57.7 +/- 26.0bp
Average Position of motif in Background45.6 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTTCACTTY
GCTTCC----
 A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTTCACTTY--
GTTTCACTTCCG
 A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C A C G T A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTCACTTY-----
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCTTCACTTY
TTCACGCATGAGTT-
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCACTTY
NGCTN------
 A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTTCACTTY
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTCACTTY----
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCTTCACTTY
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCACTTY-
ASTTTCACTTCC
 A C G T A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C A C G T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTTCACTTY-
--TTGACTTTT
 A C T G T A G C A C G T A C G T A T G C T C G A A T G C C A G T A G C T A G T C A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T