Motif 13

Information for 13-AGCGCCGCCACTA (Motif 13)

Reverse Opposite:

p-value:	1e-11
log p-value:	-2.627e+01
Information Content per bp:	1.800
Number of Target Sequences with motif	9.0
Percentage of Target Sequences with motif	0.97%
Number of Background Sequences with motif	11.9
Percentage of Background Sequences with motif	0.03%
Average Position of motif in Targets	46.9 +/- 22.6bp
Average Position of motif in Background	55.6 +/- 49.8bp
Strand Bias (log2 ratio + to - strand density)	0.3
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.67
Offset:	0
Orientation:	forward strand
Alignment:	AGCGCCGCCACTA GGCCCCGCCCCC-

PB0164.1_Smad3_2/Jaspar

Match Rank:	2
Score:	0.65
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCGCCGCCACTA-- TACGCCCCGCCACTCTG

POL003.1_GC-box/Jaspar

Match Rank:	3
Score:	0.65
Offset:	-1
Orientation:	reverse strand
Alignment:	-AGCGCCGCCACTA NAGCCCCGCCCCCN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	4
Score:	0.62
Offset:	0
Orientation:	forward strand
Alignment:	AGCGCCGCCACTA--- ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:	5
Score:	0.60
Offset:	-1
Orientation:	forward strand
Alignment:	-AGCGCCGCCACTA--- TCACCCCGCCCCAAATT

SP1/MA0079.3/Jaspar

Match Rank:	6
Score:	0.59
Offset:	1
Orientation:	forward strand
Alignment:	AGCGCCGCCACTA -GCCCCGCCCCC-

PB0113.1_E2F3_2/Jaspar

Match Rank:	7
Score:	0.59
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCGCCGCCACTA-- AGCTCGGCGCCAAAAGC

SP2/MA0516.1/Jaspar

Match Rank:	8
Score:	0.58
Offset:	1
Orientation:	forward strand
Alignment:	AGCGCCGCCACTA--- -GCCCCGCCCCCTCCC

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	9
Score:	0.58
Offset:	1
Orientation:	reverse strand
Alignment:	AGCGCCGCCACTA -GCTCCGCCCMCY

PB0112.1_E2F2_2/Jaspar

Match Rank:	10
Score:	0.57
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCGCCGCCACTA-- CCTTCGGCGCCAAAAGG