Information for 10-CGGCTTCACT (Motif 11)

A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T
Reverse Opposite:
C G T A A C T G A C G T A T C G G T C A G C T A A C T G A T G C A G T C C T A G
p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.829
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.7 +/- 29.3bp
Average Position of motif in Background52.8 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGGCTTCACT
--GCTTCC--
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCTTCACT
TGGTTTCAGT
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGCTTCACT----
--GTTTCACTTCCG
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTTCACT-------
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGCTTCACT
-NGCTN----
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTTCACT---
-ASTTTCACTTCC
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTTCACT----
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGGCTTCACT---
-----TCAGTCTT
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCTTCACT
TGACGTCA--
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGGCTTCACT---
----TTGACTTTT
 A G T C C T A G A T C G A G T C C G A T A C G T A T G C T G C A T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T