Information for 10-GCCTGACGAA (Motif 14)

A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
Reverse Opposite:
G C A T A C G T G T A C A C T G A G C T A G T C C G T A A C T G A T C G T A G C
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif73.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.5 +/- 30.8bp
Average Position of motif in Background52.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCTGACGAA----
GAATGACGAATAAC
 A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCTGACGAA----
ACCGTGACTAATTNN
 A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCTGACGAA
--ATGACGTA
 A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCTGACGAA
---TGACGT-
 A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTGACGAA
NCGTGACN--
 A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTGACGAA
AGCCTCAGGCA
 A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGACGAA
TGCCTGAGGCN
 A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCTGACGAA--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGACGAA
NGCCTGAGGCN
 A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PAX1/MA0779.1/Jaspar

Match Rank:10
Score:0.56
Offset:-9
Orientation:reverse strand
Alignment:---------GCCTGACGAA
NGCANTCATGCGTGACG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C A C G T A C T G T C G A T G A C A C T G C G T A C G T A
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T