Information for 12-ACGTGANACG (Motif 13)

G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
Reverse Opposite:
T A G C A C T G A G C T G A C T C G A T A G T C C G T A A T G C C T A G A C G T
p-value:1e-7
log p-value:-1.746e+01
Information Content per bp:1.727
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif149.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets48.6 +/- 26.3bp
Average Position of motif in Background51.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGANACG
GGGTACGTGC----
 A C G T A C G T A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ACGTGANACG
RTACGTGC----
 A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGANACG
NCACGTGACN--
 A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ACGTGANACG
TACGTGCV---
 A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ACGTGANACG
CACGTG-----
 A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACGTGANACG
GGACGTGC----
 A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACGTGANACG
GCACGTGA----
 A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACGTGANACG
ATCACGTGAT---
 A C G T A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACGTGANACG
NVCACGTG-----
 A C G T A C G T A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGANACG
CACGTGDC---
 A C G T G T C A A G T C A T C G A C G T C T A G G C T A C T G A T C G A A G T C A T C G
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T