Information for 9-AAGAGAAACTGAA (Motif 6)

T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
Reverse Opposite:
A G C T G A C T T G A C G T C A A C T G A G C T A G C T A G C T A G T C C G A T A T G C A G C T A C G T
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.629
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif149.4
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.4 +/- 25.9bp
Average Position of motif in Background50.7 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGAAACTGAA
GGAAANTGAAACTNA-
 A C G T A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGAAACTGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAGAGAAACTGAA
CAAAATCGAAACTAA-
 A C G T A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAGAGAAACTGAA
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGAAACTGAA
GAAAMTGAAACT---
 A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGAAACTGAA
GAAACTGAAACT---
 A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAGAGAAACTGAA
GRAASTGAAAST---
 A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGAAACTGAA
GAAAGTGAAAGT---
 A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAGAGAAACTGAA
GAAASYGAAASY---
 A C G T A C G T T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AAGAGAAACTGAA---
----GAAAGTGAAAGT
 T G C A T C G A T A C G G C T A C T A G T C G A T C G A T C G A T A G C A C G T A C T G C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T