Information for 5-GCGGTGTTTC (Motif 4)

A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C
Reverse Opposite:
A T C G T C G A C T G A C G T A G T A C T G C A T A G C G A T C A T C G G T A C
p-value:1e-16
log p-value:-3.800e+01
Information Content per bp:1.689
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.94%
Number of Background Sequences with motif590.7
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets50.3 +/- 24.8bp
Average Position of motif in Background49.8 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGGTGTTTC
GCAGTGATTT
 A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTGTTTC
TGCTGTGATTT
 A C G T A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGTGTTTC-
GGGGGTGTGTCC
 A C G T A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTTTC
TTGCGGTTT---
 A C G T A C G T A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGGTGTTTC-
---CTGTTTAC
 A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T
A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGGTGTTTC-
-GGGGATTTCC
 A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCGGTGTTTC---
---TGGTTTCAGT
 A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGTTTC---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGTGTTTC-
-CNGTGATTTN
 A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCGGTGTTTC
AGGGGGCGGGGCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T A G A T C G A C G T A C T G G C A T G A C T A G C T T A G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T