Information for 3-YBTGGGAATTGTAGTT (Motif 3)

A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
Reverse Opposite:
C T G A G T C A A T G C A G C T G T C A A G T C C T G A C T G A G A C T C G A T A T G C G T A C A G T C C G T A T C A G T C G A
p-value:1e-18
log p-value:-4.260e+01
Information Content per bp:1.681
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets40.2 +/- 23.0bp
Average Position of motif in Background49.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:3
Orientation:reverse strand
Alignment:YBTGGGAATTGTAGTT
---GGGAATTGTAGT-
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----YBTGGGAATTGTAGTT
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----YBTGGGAATTGTAGTT
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YBTGGGAATTGTAGTT
CSTGGGAAAD------
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----YBTGGGAATTGTAGTT
RGSMTBCTGGGAAAT------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YBTGGGAATTGTAGTT
WDNCTGGGCA--------
 A C G T A C G T A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YBTGGGAATTGTAGTT--
--TGGGCGACGTCGTTAA
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T A C G T A C G T
A C G T A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:YBTGGGAATTGTAGTT--
--------CTGTGGTTTN
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YBTGGGAATTGTAGTT--
------NNHTGTGGTTWN
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:YBTGGGAATTGTAGTT
-TTGGCA---------
 A G C T A G T C A C G T A C T G A C T G A T C G C G T A C T G A G A C T A G C T A C T G A C G T T C G A A T C G A C G T G A C T
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T