p-value: | 1e-9 |
log p-value: | -2.274e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 44.6 +/- 23.2bp |
Average Position of motif in Background | 23.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL012.1_TATA-Box/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCGCATTTATAG NNNNNNCTTTTATAN |
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TBP/MA0108.2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCGCATTTATAG NNNNNNCTTTTATAN |
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PB0077.1_Spdef_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCCGCATTTATAG GTACATCCGGATTTTT-- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCCGCATTTATAG-- ---CCTTTTATAGNC |
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SRF/MA0083.3/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCCGCATTTATAG--- TGACCATATATGGTCA |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCCGCATTTATAG-- --NTGATTTATGGCC |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCGCATTTATAG-- ---DGWTTTATGRCN |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCGCATTTATAG-- ---TGATTTATGGCC |
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SPIC/MA0687.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCCGCATTTATAG TACTTCCTCTTTTN--- |
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MF0008.1_MADS_class/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCCGCATTTATAG ---CCATATATGG |
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