Information for 7-GSSCAGGYGYCAG (Motif 5)

A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C T G A A T G C C T G A A G T C A G T C A C G T A C T G A T G C A T C G A G T C
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.876
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 23.2bp
Average Position of motif in Background53.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GSSCAGGYGYCAG
----AGGTGTCA-
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG
-GACAGGTGTN--
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG
-NNCAGGTGNN--
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG
SDGCAGGTGCNS-
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG
-NNCAGGTGCG--
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG
-NNCAGGTGTN--
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GSSCAGGYGYCAG
TGCGCAGGCGC---
 A C G T A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GSSCAGGYGYCAG
-AACAGGTGT---
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GSSCAGGYGYCAG
----AGGTGTGA-
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GSSCAGGYGYCAG----
----AGGTGNCAGACAG
 A C T G A T G C A T C G A G T C C G T A A C T G A C T G A G C T A T C G A G C T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G