Information for 12-CTGTCTTTCT (Motif 13)

A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C G T A C G T A C T A G C G T A A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.907e+01
Information Content per bp:1.935
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif77.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets52.5 +/- 29.3bp
Average Position of motif in Background46.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTGTCTTTCT
GTCWGCTGTYYCTCT
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCTTTCT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTTTCT-
NCTGTCAATCAN
 A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTTTCT
GCTGTG-----
 A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTCTTTCT---
CTGTCTGTCACCT
 A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTTTCT
GSCTGTCACTCA
 A C G T A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTCTTTCT
NNGTANTGTTTTNC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTCTTTCT-----
-NNTTTTTCTTATNT
 A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTCTTTCT---
-TGTCTGDCACCT
 A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTGTCTTTCT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C A G C T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T