Information for 6-YSGGAATTGT (Motif 5)

A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T
Reverse Opposite:
G C T A T A G C G C T A C T G A G C A T A G C T T A G C A G T C T A C G T C G A
p-value:1e-17
log p-value:-4.034e+01
Information Content per bp:1.574
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif305.0
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets44.4 +/- 27.9bp
Average Position of motif in Background46.8 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:YSGGAATTGT---
-GGGAATTGTAGT
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:YSGGAATTGT------
--AAAATTGTTATGAA
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:YSGGAATTGT---
---CCATTGTTNY
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------YSGGAATTGT----
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------YSGGAATTGT----
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-YSGGAATTGT------
GGAAAAATTGTTAGGAA
 A C G T A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:YSGGAATTGT----
-----ATTGTTTAN
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:YSGGAATTGT-
-----ATTGTT
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YSGGAATTGT-------
CNNNTATTGTTCNNNNN
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:YSGGAATTGT--
-----ATTGTTA
 A G C T A T G C T C A G A T C G T C G A C G T A G A C T C G A T A T C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T