Information for 13-AAGGGAAAGTGAA (Motif 11)

G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A
Reverse Opposite:
A C G T A G C T A G T C T G C A A G T C A C G T A G C T A G C T A G T C T A G C G T A C A G C T A C G T
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.701
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif172.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets44.1 +/- 25.4bp
Average Position of motif in Background51.2 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---AAGGGAAAGTGAA
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGAAAGTGAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGAAAGTGAA
GAAAGTGAAAGT---
 A C G T A C G T G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AAGGGAAAGTGAA--------
---GGAAAGCGAAACCAAAAC
 G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AAGGGAAAGTGAA---
----GAAAGTGAAAGT
 G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AAGGGAAAGTGAA---
----GAAASYGAAASY
 G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAGGGAAAGTGAA---
----GAAACTGAAACT
 G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGGAAAGTGAA
GRAASTGAAAST---
 A C G T A C G T G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAGGGAAAGTGAA---
----GAAAMTGAAACT
 G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGGAAAGTGAA
TAGGGCAAAGGTCA
 A C G T G T C A C T G A C A T G A T C G T C A G C T G A C T G A G T C A T C A G A C G T T C A G T C G A C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A