Information for 13-GCCMTGTTGGTGA (Motif 9)

C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A A G T C A T G C C G T A C T G A A G T C C G T A A C G T A C T G A T C G A G T C
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.816
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets72.8 +/- 12.4bp
Average Position of motif in Background32.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCMTGTTGGTGA
GCNGCCATCTTG----
 A C G T A C G T A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCCMTGTTGGTGA
-------TGGGGA
 C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCMTGTTGGTGA
GCCGCCATCTTG----
 A C G T A C G T A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCMTGTTGGTGA---
TGACCTCTCNNTGACCT
 A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A A C G T A C G T A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCMTGTTGGTGA
GGGGCTYGKCTGGGA
 A C G T A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCCMTGTTGGTGA
--TATGCGGGTA-
 C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------GCCMTGTTGGTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCCMTGTTGGTGA
CCCCCTGCTGTG--
 A C G T C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GCCMTGTTGGTGA
-----GTTTGTT-
 C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GCCMTGTTGGTGA----
-----GGTGYTGACAGS
 C T A G A T G C G T A C T G A C A C G T A C T G A G C T C G A T A T C G A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G