Information for 15-TGGAAMTTCT (Motif 15)

A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A C T G A C G T A C G T G T A C A G T C C G T A
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.0 +/- 22.0bp
Average Position of motif in Background63.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGAAMTTCT-
-GGAAATTCCC
 A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAMTTCT
NNTGGAAANN--
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGAAMTTCT-
-GGAAATTCCC
 A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAMTTCT
AATGGAAAAT--
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAMTTCT
AATGGAAAAT--
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAMTTCT
NATGGAAAAN--
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGAAMTTCT
TGGAAAA---
 A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGGAAMTTCT-------
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAAMTTCT-
-GGAAANCCCC
 A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAAMTTCT-
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A G T A C A C G T A C G T A G T C A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A