Information for 1-NGCCGCCATTTTG (Motif 1)

T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
Reverse Opposite:
G T A C C T G A C G T A T C G A C G T A C A G T A C T G A C T G G T A C A T C G A T C G G A T C A G T C
p-value:1e-637
log p-value:-1.467e+03
Information Content per bp:1.664
Number of Target Sequences with motif517.0
Percentage of Target Sequences with motif55.24%
Number of Background Sequences with motif746.6
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets52.6 +/- 20.2bp
Average Position of motif in Background52.4 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:NGCCGCCATTTTG
-GCNGCCATCTTG
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NGCCGCCATTTTG
-GCCGCCATCTTG
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:NGCCGCCATTTTG
GTCCGCCATTA--
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----NGCCGCCATTTTG
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----NGCCGCCATTTTG
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----NGCCGCCATTTTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NGCCGCCATTTTG----
TGTTCCCATTGTGTACT
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:NGCCGCCATTTTG
-----CCTTTGTT
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:NGCCGCCATTTTG--
-----CCATTGTTYB
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:NGCCGCCATTTTG-
----GCCATCTGTT
 T C A G C T A G A T G C T A G C C A T G A G T C A G T C G C T A A C G T A G C T C G A T A G C T C A T G A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T