Information for 10-CTKTTTCTYGSYC (Motif 9)

A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
Reverse Opposite:
A C T G C T G A A T C G A G T C C T A G C G T A A C T G C G T A C G T A C T G A G T C A C G T A A C T G
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 20.5bp
Average Position of motif in Background68.0 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTKTTTCTYGSYC--
AGTATTCTCGGTTGC
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTKTTTCTYGSYC
-NTTTTATTGG--
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTKTTTCTYGSYC
-TTTTTATTGG--
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTKTTTCTYGSYC--
NNAATTCTCGNTNAN
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTKTTTCTYGSYC
--TTTTATGGCTN
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTKTTTCTYGSYC
TTCTATTTTTAGNNN
 A C G T A C G T A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTKTTTCTYGSYC
GCTATTTTTAGC--
 A C G T A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTKTTTCTYGSYC
GCTATTTATAGC--
 A C G T A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTKTTTCTYGSYC
GCTATTTTTGGM--
 A C G T A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTKTTTCTYGSYC
-NTTTTATTGG--
 A G T C C G A T A C G T A G C T A C G T A C G T A G T C A C G T A G T C C T A G A T G C A G C T A G T C
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T