Information for 16-CGTAGTACGT (Motif 18)

A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T
Reverse Opposite:
G T C A G T A C A C T G A G C T C G T A A T G C A C G T C G T A A G T C A C T G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.3 +/- 20.9bp
Average Position of motif in Background59.6 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGTACGT------
NNNTNGTACGTAANNNN
 A C G T A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGTACGT------
NNNTNGTACGTAANNNN
 A C G T A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

GMEB2/MA0862.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGTAGTACGT--
----TTACGTAA
 A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTAGTACGT----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGTAGTACGT--
--GGGTACGTGC
 A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGTAGTACGT---
-----TACGTGCV
 A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CGTAGTACGT-
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGTAGTACGT--
----GGACGTGC
 A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGTAGTACGT-
TATCATTAGAACGCT
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGTAGTACGT--
----RTACGTGC
 A G T C A C T G A C G T C G T A A T C G C G A T C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C