Information for 14-CCCCGCCHCCTTC (Motif 13)

A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
Reverse Opposite:
A C T G T C G A G T C A C T A G C T A G C T G A A C T G C T A G A G T C C T A G C T A G A T C G A T C G
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.754
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif586.9
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets45.4 +/- 27.4bp
Average Position of motif in Background47.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCHCCTTC-
GCCCCGCCCCCTCCC
 A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCCHCCTTC--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCHCCTTC
GCCCCGCCCCC---
 A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCCHCCTTC
CCCCCGCCCCCGCC
 A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCCHCCTTC
GGCCCCGCCCCC---
 A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCCHCCTTC
NAGCCCCGCCCCCN--
 A C G T A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCHCCTTC
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCHCCTTC
GCTCCGCCCMCY--
 A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCHCCTTC
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCCHCCTTC
TCGACCCCGCCCCTAT-
 A C G T A C G T A C G T A C G T A T G C T A G C G A T C A G T C A C T G A G T C A G T C G A C T A G T C G A T C C A G T A G C T T G A C
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T