Information for 13-CAGCTSCAGTAAC (Motif 12)

A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
Reverse Opposite:
A C T G A C G T A G C T C G T A A G T C C G A T C T A G A T C G C G T A A C T G A G T C A G C T A C T G
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.836
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets36.9 +/- 22.3bp
Average Position of motif in Background59.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGCTSCAGTAAC
NCAGCTGCTG----
 A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGCTSCAGTAAC
AGCAGCTGCTNN---
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCTSCAGTAAC
GACAGCTGCAG----
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCTSCAGTAAC
AACAGCTGCAG----
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGCTSCAGTAAC
NNACAGCTGC------
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTSCAGTAAC
AGCAGCTGCT-----
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGCTSCAGTAAC
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTSCAGTAAC
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGCTSCAGTAAC
BAACAGCTGT------
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CAGCTSCAGTAAC
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A T G C A G T C C G T A A C T G C G A T T C G A G T C A G T A C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T